Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHA4P54764 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
EPHA4P54764 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHA4P54764 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EPHA4P54764 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
EPHA4P54764 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.59■□□□□ 0.25
EPHA4P54764 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
EPHA4P54764 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.59■□□□□ 0.25
EPHA4P54764 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.59■□□□□ 0.25
EPHA4P54764 AC005829.1-201ENST00000570002 483 ntBASIC16.59■□□□□ 0.25
EPHA4P54764 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.59■□□□□ 0.25
EPHA4P54764 C20orf181-201ENST00000623918 480 ntBASIC16.59■□□□□ 0.25
EPHA4P54764 AC092865.6-201ENST00000642101 219 ntBASIC16.59■□□□□ 0.25
EPHA4P54764 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 AC012317.2-201ENST00000623305 2251 ntBASIC16.59■□□□□ 0.25
EPHA4P54764 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
EPHA4P54764 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.59■□□□□ 0.25
EPHA4P54764 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHA4P54764 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHA4P54764 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA4P54764 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHA4P54764 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
EPHA4P54764 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.58■□□□□ 0.25
EPHA4P54764 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA4P54764 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA4P54764 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
EPHA4P54764 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA4P54764 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA4P54764 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA4P54764 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA4P54764 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.58■□□□□ 0.25
EPHA4P54764 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA4P54764 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
EPHA4P54764 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
EPHA4P54764 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
EPHA4P54764 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
EPHA4P54764 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.58■□□□□ 0.24
EPHA4P54764 MKNK2P1-201ENST00000437526 628 ntBASIC16.58■□□□□ 0.24
EPHA4P54764 YBX1P5-201ENST00000509441 847 ntBASIC16.58■□□□□ 0.24
EPHA4P54764 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.58■□□□□ 0.24
EPHA4P54764 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
EPHA4P54764 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.58■□□□□ 0.24
EPHA4P54764 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 AC023141.13-201ENST00000604991 943 ntBASIC16.58■□□□□ 0.24
EPHA4P54764 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.58■□□□□ 0.24
EPHA4P54764 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.58■□□□□ 0.24
EPHA4P54764 AL513190.1-201ENST00000621254 727 ntBASIC16.58■□□□□ 0.24
EPHA4P54764 AC004877.2-201ENST00000623941 599 ntBASIC16.58■□□□□ 0.24
EPHA4P54764 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.58■□□□□ 0.24
EPHA4P54764 BCAR1-209ENST00000546196 1340 ntBASIC16.58■□□□□ 0.24
EPHA4P54764 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.58■□□□□ 0.24
EPHA4P54764 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 AL355312.1-201ENST00000407115 2176 ntBASIC16.58■□□□□ 0.24
EPHA4P54764 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
EPHA4P54764 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.58■□□□□ 0.24
EPHA4P54764 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.58■□□□□ 0.24
EPHA4P54764 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA4P54764 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
EPHA4P54764 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.57■□□□□ 0.24
EPHA4P54764 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.57■□□□□ 0.24
EPHA4P54764 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.57■□□□□ 0.24
EPHA4P54764 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
EPHA4P54764 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 AC129492.6-201ENST00000611383 1305 ntBASIC16.57■□□□□ 0.24
EPHA4P54764 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.57■□□□□ 0.24
EPHA4P54764 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
EPHA4P54764 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA4P54764 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.57■□□□□ 0.24
EPHA4P54764 AC087163.2-201ENST00000457299 853 ntBASIC16.57■□□□□ 0.24
EPHA4P54764 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.57■□□□□ 0.24
EPHA4P54764 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.57■□□□□ 0.24
EPHA4P54764 KRT19P2-202ENST00000557173 1012 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms