Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.98■□□□□ 0.31
GTF2A1P52655 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.98■□□□□ 0.31
GTF2A1P52655 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GTF2A1P52655 AC007322.1-201ENST00000426983 750 ntBASIC16.98■□□□□ 0.31
GTF2A1P52655 KRT18P5-201ENST00000436075 1291 ntBASIC16.98■□□□□ 0.31
GTF2A1P52655 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.98■□□□□ 0.31
GTF2A1P52655 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.98■□□□□ 0.31
GTF2A1P52655 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.98■□□□□ 0.31
GTF2A1P52655 AC087623.3-201ENST00000607047 1098 ntBASIC16.98■□□□□ 0.31
GTF2A1P52655 MYC-208ENST00000641036 567 ntBASIC16.98■□□□□ 0.31
GTF2A1P52655 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
GTF2A1P52655 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
GTF2A1P52655 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GTF2A1P52655 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GTF2A1P52655 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.98■□□□□ 0.31
GTF2A1P52655 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.97■□□□□ 0.31
GTF2A1P52655 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GTF2A1P52655 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GTF2A1P52655 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.97■□□□□ 0.31
GTF2A1P52655 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 AC006015.1-201ENST00000429970 570 ntBASIC16.97■□□□□ 0.31
GTF2A1P52655 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 AC231657.2-201ENST00000624556 255 ntBASIC16.97■□□□□ 0.31
GTF2A1P52655 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GTF2A1P52655 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.97■□□□□ 0.31
GTF2A1P52655 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.97■□□□□ 0.31
GTF2A1P52655 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GTF2A1P52655 LSM12P1-201ENST00000411836 588 ntBASIC16.96■□□□□ 0.31
GTF2A1P52655 AL512625.2-201ENST00000417533 625 ntBASIC16.96■□□□□ 0.31
GTF2A1P52655 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms