Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN3P51790 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN3P51790 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CLCN3P51790 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCN3P51790 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.9■□□□□ 0.62
CLCN3P51790 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.9■□□□□ 0.62
CLCN3P51790 DNAJB3-202ENST00000449667 1266 ntBASIC18.9■□□□□ 0.62
CLCN3P51790 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.9■□□□□ 0.62
CLCN3P51790 YBX1P5-201ENST00000509441 847 ntBASIC18.9■□□□□ 0.62
CLCN3P51790 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
CLCN3P51790 AC007064.4-201ENST00000637740 555 ntBASIC18.9■□□□□ 0.62
CLCN3P51790 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLCN3P51790 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLCN3P51790 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN3P51790 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCN3P51790 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLCN3P51790 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLCN3P51790 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLCN3P51790 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN3P51790 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN3P51790 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLCN3P51790 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CLCN3P51790 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCN3P51790 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CLCN3P51790 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.89■□□□□ 0.61
CLCN3P51790 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN3P51790 AL513480.1-201ENST00000451731 511 ntBASIC18.89■□□□□ 0.61
CLCN3P51790 AC074386.1-202ENST00000463561 864 ntBASIC18.89■□□□□ 0.61
CLCN3P51790 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
CLCN3P51790 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CLCN3P51790 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN3P51790 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLCN3P51790 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN3P51790 AC068880.1-201ENST00000507289 2297 ntBASIC18.89■□□□□ 0.61
CLCN3P51790 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CLCN3P51790 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CLCN3P51790 AC107918.2-201ENST00000530817 355 ntBASIC18.88■□□□□ 0.61
CLCN3P51790 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCN3P51790 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
CLCN3P51790 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 AL596442.2-201ENST00000610240 980 ntBASIC18.88■□□□□ 0.61
CLCN3P51790 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 NOC2LP2-201ENST00000407594 1944 ntBASIC18.88■□□□□ 0.61
CLCN3P51790 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CLCN3P51790 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN3P51790 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLCN3P51790 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCN3P51790 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN3P51790 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms