Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRIM2P49643 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.47■□□□□ 0.23
PRIM2P49643 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRIM2P49643 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.47■□□□□ 0.23
PRIM2P49643 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.47■□□□□ 0.23
PRIM2P49643 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.47■□□□□ 0.23
PRIM2P49643 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 COX5BP2-201ENST00000392354 334 ntBASIC16.47■□□□□ 0.23
PRIM2P49643 FAM86EP-206ENST00000510506 987 ntBASIC16.47■□□□□ 0.23
PRIM2P49643 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.47■□□□□ 0.23
PRIM2P49643 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.47■□□□□ 0.23
PRIM2P49643 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.47■□□□□ 0.23
PRIM2P49643 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.47■□□□□ 0.23
PRIM2P49643 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.47■□□□□ 0.23
PRIM2P49643 AL445228.2-201ENST00000605589 952 ntBASIC16.47■□□□□ 0.23
PRIM2P49643 AL353801.3-201ENST00000609898 542 ntBASIC16.47■□□□□ 0.23
PRIM2P49643 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.47■□□□□ 0.23
PRIM2P49643 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.47■□□□□ 0.23
PRIM2P49643 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.47■□□□□ 0.23
PRIM2P49643 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.47■□□□□ 0.23
PRIM2P49643 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRIM2P49643 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.47■□□□□ 0.23
PRIM2P49643 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.47■□□□□ 0.23
PRIM2P49643 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PRIM2P49643 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRIM2P49643 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PRIM2P49643 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PRIM2P49643 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.46■□□□□ 0.23
PRIM2P49643 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.46■□□□□ 0.23
PRIM2P49643 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.46■□□□□ 0.23
PRIM2P49643 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRIM2P49643 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.46■□□□□ 0.23
PRIM2P49643 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.46■□□□□ 0.23
PRIM2P49643 CHCHD2P8-201ENST00000429873 447 ntBASIC16.46■□□□□ 0.23
PRIM2P49643 AC246785.2-201ENST00000432512 513 ntBASIC16.46■□□□□ 0.23
PRIM2P49643 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.46■□□□□ 0.23
PRIM2P49643 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.46■□□□□ 0.23
PRIM2P49643 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.46■□□□□ 0.23
PRIM2P49643 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.46■□□□□ 0.23
PRIM2P49643 AL139327.4-201ENST00000612362 153 ntBASIC16.46■□□□□ 0.23
PRIM2P49643 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PRIM2P49643 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PRIM2P49643 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRIM2P49643 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.46■□□□□ 0.23
PRIM2P49643 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRIM2P49643 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRIM2P49643 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.45■□□□□ 0.22
PRIM2P49643 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.45■□□□□ 0.22
PRIM2P49643 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.45■□□□□ 0.22
PRIM2P49643 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PRIM2P49643 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PRIM2P49643 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PRIM2P49643 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRIM2P49643 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.45■□□□□ 0.22
PRIM2P49643 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PRIM2P49643 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PRIM2P49643 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.45■□□□□ 0.22
PRIM2P49643 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRIM2P49643 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms