Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
CCNFP41002 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCNFP41002 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCNFP41002 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.4■□□□□ 0.38
CCNFP41002 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCNFP41002 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCNFP41002 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.4■□□□□ 0.38
CCNFP41002 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.4■□□□□ 0.38
CCNFP41002 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCNFP41002 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCNFP41002 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
CCNFP41002 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCNFP41002 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCNFP41002 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CCNFP41002 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCNFP41002 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCNFP41002 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 UPK3BP1-201ENST00000428678 509 ntBASIC17.39■□□□□ 0.37
CCNFP41002 ATP5G2P1-201ENST00000433580 426 ntBASIC17.39■□□□□ 0.37
CCNFP41002 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CCNFP41002 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.39■□□□□ 0.37
CCNFP41002 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.39■□□□□ 0.37
CCNFP41002 AP002414.4-201ENST00000589764 1148 ntBASIC17.39■□□□□ 0.37
CCNFP41002 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.39■□□□□ 0.37
CCNFP41002 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.39■□□□□ 0.37
CCNFP41002 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 AC097374.2-201ENST00000618617 1306 ntBASIC17.39■□□□□ 0.37
CCNFP41002 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCNFP41002 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCNFP41002 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCNFP41002 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCNFP41002 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 AP002383.4-201ENST00000442518 975 ntBASIC17.38■□□□□ 0.37
CCNFP41002 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNFP41002 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.38■□□□□ 0.37
CCNFP41002 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 AC124947.2-201ENST00000547118 1133 ntBASIC17.38■□□□□ 0.37
CCNFP41002 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNFP41002 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNFP41002 Z69720.1-201ENST00000601483 472 ntBASIC17.38■□□□□ 0.37
CCNFP41002 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNFP41002 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.38■□□□□ 0.37
CCNFP41002 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNFP41002 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.38■□□□□ 0.37
CCNFP41002 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CCNFP41002 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCNFP41002 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CCNFP41002 DOC2GP-204ENST00000639052 2548 ntBASIC17.38■□□□□ 0.37
CCNFP41002 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms