Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.92■□□□□ 0.62
KRT9P35527 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 RN7SL606P-201ENST00000472779 293 ntBASIC18.92■□□□□ 0.62
KRT9P35527 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT9P35527 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 AL121672.3-201ENST00000608644 468 ntBASIC18.92■□□□□ 0.62
KRT9P35527 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 PCDH8P1-201ENST00000428983 2773 ntBASIC18.92■□□□□ 0.62
KRT9P35527 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT9P35527 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
KRT9P35527 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT9P35527 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRT9P35527 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 PCED1CP-201ENST00000419887 785 ntBASIC18.91■□□□□ 0.62
KRT9P35527 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT9P35527 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
KRT9P35527 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT9P35527 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT9P35527 AL592071.1-201ENST00000611956 408 ntBASIC18.91■□□□□ 0.62
KRT9P35527 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT9P35527 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT9P35527 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT9P35527 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT9P35527 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT9P35527 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.91■□□□□ 0.62
KRT9P35527 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT9P35527 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT9P35527 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRT9P35527 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT9P35527 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT9P35527 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
KRT9P35527 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT9P35527 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT9P35527 AC011840.4-201ENST00000578471 627 ntBASIC18.9■□□□□ 0.62
KRT9P35527 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
KRT9P35527 AC116407.4-201ENST00000623319 1061 ntBASIC18.9■□□□□ 0.62
KRT9P35527 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT9P35527 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT9P35527 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT9P35527 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KRT9P35527 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT9P35527 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT9P35527 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT9P35527 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KRT9P35527 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
KRT9P35527 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
KRT9P35527 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms