Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.29■□□□□ 0.04
MSR1P21757 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.29■□□□□ 0.04
MSR1P21757 MIR5100-201ENST00000579544 119 ntBASIC15.29■□□□□ 0.04
MSR1P21757 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.29■□□□□ 0.04
MSR1P21757 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.29■□□□□ 0.04
MSR1P21757 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.29■□□□□ 0.04
MSR1P21757 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MSR1P21757 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MSR1P21757 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MSR1P21757 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MSR1P21757 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
MSR1P21757 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MSR1P21757 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MSR1P21757 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.28■□□□□ 0.04
MSR1P21757 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MSR1P21757 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
MSR1P21757 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MSR1P21757 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.28■□□□□ 0.04
MSR1P21757 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MSR1P21757 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MSR1P21757 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.28■□□□□ 0.04
MSR1P21757 HCG4P8-203ENST00000443049 980 ntBASIC15.28■□□□□ 0.04
MSR1P21757 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.28■□□□□ 0.04
MSR1P21757 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 AL591684.3-201ENST00000605187 298 ntBASIC15.28■□□□□ 0.04
MSR1P21757 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.28■□□□□ 0.04
MSR1P21757 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 AP000867.4-201ENST00000641616 219 ntBASIC15.28■□□□□ 0.04
MSR1P21757 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MSR1P21757 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 AL135999.2-201ENST00000622438 1686 ntBASIC15.28■□□□□ 0.04
MSR1P21757 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MSR1P21757 PRORSD1P-202ENST00000563365 2154 ntBASIC15.28■□□□□ 0.04
MSR1P21757 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MSR1P21757 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
MSR1P21757 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.27■□□□□ 0.04
MSR1P21757 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.27■□□□□ 0.04
MSR1P21757 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MSR1P21757 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 LINC02012-201ENST00000608206 1725 ntBASIC15.27■□□□□ 0.04
MSR1P21757 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MSR1P21757 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.27■□□□□ 0.04
MSR1P21757 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.27■□□□□ 0.04
MSR1P21757 SLC25A1P3-201ENST00000395415 828 ntBASIC15.27■□□□□ 0.04
MSR1P21757 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.27■□□□□ 0.04
MSR1P21757 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.27■□□□□ 0.04
MSR1P21757 ABCD1P5-201ENST00000445663 754 ntBASIC15.27■□□□□ 0.04
MSR1P21757 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MSR1P21757 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.27■□□□□ 0.04
MSR1P21757 MIR3652-201ENST00000579335 131 ntBASIC15.27■□□□□ 0.04
MSR1P21757 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
MSR1P21757 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MSR1P21757 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms