Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
THRAP10827 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.37■□□□□ 0.37
THRAP10827 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.37■□□□□ 0.37
THRAP10827 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.37■□□□□ 0.37
THRAP10827 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
THRAP10827 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
THRAP10827 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
THRAP10827 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.37■□□□□ 0.37
THRAP10827 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.37■□□□□ 0.37
THRAP10827 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
THRAP10827 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
THRAP10827 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
THRAP10827 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
THRAP10827 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
THRAP10827 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
THRAP10827 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
THRAP10827 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
THRAP10827 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
THRAP10827 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 AL022342.1-201ENST00000400363 863 ntBASIC17.36■□□□□ 0.37
THRAP10827 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
THRAP10827 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 TP73-AS1-207ENST00000624167 988 ntBASIC17.36■□□□□ 0.37
THRAP10827 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
THRAP10827 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THRAP10827 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
THRAP10827 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.35■□□□□ 0.37
THRAP10827 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
THRAP10827 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.35■□□□□ 0.37
THRAP10827 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.35■□□□□ 0.37
THRAP10827 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
THRAP10827 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.35■□□□□ 0.37
THRAP10827 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.35■□□□□ 0.37
THRAP10827 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.35■□□□□ 0.37
THRAP10827 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
THRAP10827 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
THRAP10827 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.35■□□□□ 0.37
THRAP10827 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms