Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 TPSP2-201ENST00000561760 610 ntBASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 AL358472.4-201ENST00000633140 710 ntBASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 NKILA-202ENST00000614771 2598 ntBASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 AL049757.1-201ENST00000616842 1596 ntBASIC14.39□□□□□ -0.11
IGHV3-43DP0DP04 AC011676.5-201ENST00000624864 2660 ntBASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 ARMC10P1-201ENST00000313754 855 ntBASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 AC096582.2-201ENST00000510860 516 ntBASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 AC009533.2-201ENST00000543664 586 ntBASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 Z69720.1-201ENST00000601483 472 ntBASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 AP000550.4-202ENST00000639755 178 ntBASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV3-43DP0DP04 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 AC079328.2-201ENST00000561241 3354 ntBASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 AC084018.2-201ENST00000613093 2607 ntBASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 AC116353.5-201ENST00000638148 1699 ntBASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 AC103564.2-201ENST00000432853 1299 ntBASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 AP000867.3-201ENST00000524675 377 ntBASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 AC074051.2-201ENST00000565115 352 ntBASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV3-43DP0DP04 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms