Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.78■□□□□ 0.44
RHOP08100 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.78■□□□□ 0.44
RHOP08100 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.78■□□□□ 0.44
RHOP08100 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RHOP08100 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.78■□□□□ 0.44
RHOP08100 RN7SL589P-201ENST00000481268 310 ntBASIC17.78■□□□□ 0.44
RHOP08100 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.78■□□□□ 0.44
RHOP08100 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.78■□□□□ 0.44
RHOP08100 AC079140.1-201ENST00000508039 487 ntBASIC17.78■□□□□ 0.44
RHOP08100 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.78■□□□□ 0.44
RHOP08100 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.78■□□□□ 0.44
RHOP08100 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.78■□□□□ 0.44
RHOP08100 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.78■□□□□ 0.44
RHOP08100 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.78■□□□□ 0.44
RHOP08100 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.78■□□□□ 0.44
RHOP08100 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.78■□□□□ 0.44
RHOP08100 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RHOP08100 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.78■□□□□ 0.44
RHOP08100 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.78■□□□□ 0.44
RHOP08100 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.77■□□□□ 0.44
RHOP08100 AL355312.1-201ENST00000407115 2176 ntBASIC17.77■□□□□ 0.44
RHOP08100 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
RHOP08100 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.77■□□□□ 0.44
RHOP08100 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.77■□□□□ 0.44
RHOP08100 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RHOP08100 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 HMGA1P7-201ENST00000406908 502 ntBASIC17.77■□□□□ 0.44
RHOP08100 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.77■□□□□ 0.44
RHOP08100 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.77■□□□□ 0.44
RHOP08100 AC243562.1-201ENST00000560672 389 ntBASIC17.77■□□□□ 0.44
RHOP08100 AL135744.1-201ENST00000565098 629 ntBASIC17.77■□□□□ 0.44
RHOP08100 AC005412.3-201ENST00000580309 715 ntBASIC17.77■□□□□ 0.44
RHOP08100 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RHOP08100 AC005498.2-205ENST00000593218 784 ntBASIC17.77■□□□□ 0.44
RHOP08100 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RHOP08100 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RHOP08100 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.77■□□□□ 0.44
RHOP08100 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.77■□□□□ 0.44
RHOP08100 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RHOP08100 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.77■□□□□ 0.43
RHOP08100 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RHOP08100 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RHOP08100 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RHOP08100 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RHOP08100 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.77■□□□□ 0.43
RHOP08100 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RHOP08100 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.77■□□□□ 0.43
RHOP08100 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
RHOP08100 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RHOP08100 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RHOP08100 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RHOP08100 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.76■□□□□ 0.43
RHOP08100 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RHOP08100 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.76■□□□□ 0.43
RHOP08100 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RHOP08100 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.76■□□□□ 0.43
RHOP08100 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.76■□□□□ 0.43
RHOP08100 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.76■□□□□ 0.43
RHOP08100 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.76■□□□□ 0.43
RHOP08100 RARRES2P8-201ENST00000566335 367 ntBASIC17.76■□□□□ 0.43
RHOP08100 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.76■□□□□ 0.43
RHOP08100 Z92544.3-201ENST00000624747 417 ntBASIC17.76■□□□□ 0.43
RHOP08100 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.76■□□□□ 0.43
RHOP08100 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHOP08100 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.76■□□□□ 0.43
RHOP08100 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms