Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.15■□□□□ 0.02
LCATP04180 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCATP04180 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.15■□□□□ 0.02
LCATP04180 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.14■□□□□ 0.01
LCATP04180 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LCATP04180 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.14■□□□□ 0.01
LCATP04180 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LCATP04180 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.14■□□□□ 0.01
LCATP04180 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LCATP04180 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LCATP04180 RCN1P2-201ENST00000398357 915 ntBASIC15.14■□□□□ 0.01
LCATP04180 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.14■□□□□ 0.01
LCATP04180 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.14■□□□□ 0.01
LCATP04180 POM121L3P-201ENST00000419331 1163 ntBASIC15.14■□□□□ 0.01
LCATP04180 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 STK19B-204ENST00000512515 211 ntBASIC15.14■□□□□ 0.01
LCATP04180 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.14■□□□□ 0.01
LCATP04180 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.14■□□□□ 0.01
LCATP04180 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.14■□□□□ 0.01
LCATP04180 STK25P1-201ENST00000585406 838 ntBASIC15.14■□□□□ 0.01
LCATP04180 AC099336.1-202ENST00000602961 463 ntBASIC15.14■□□□□ 0.01
LCATP04180 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.14■□□□□ 0.01
LCATP04180 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.14■□□□□ 0.01
LCATP04180 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LCATP04180 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.14■□□□□ 0.01
LCATP04180 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LCATP04180 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
LCATP04180 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCATP04180 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LCATP04180 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LCATP04180 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.13■□□□□ 0.01
LCATP04180 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LCATP04180 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LCATP04180 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LCATP04180 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 UPK3BP1-201ENST00000428678 509 ntBASIC15.13■□□□□ 0.01
LCATP04180 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.13■□□□□ 0.01
LCATP04180 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.13■□□□□ 0.01
LCATP04180 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.13■□□□□ 0.01
LCATP04180 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.13■□□□□ 0.01
LCATP04180 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.13■□□□□ 0.01
LCATP04180 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LCATP04180 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.13■□□□□ 0.01
LCATP04180 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 INTS4P1-201ENST00000438455 1935 ntBASIC15.13■□□□□ 0.01
LCATP04180 AL353593.2-201ENST00000602529 1483 ntBASIC15.13■□□□□ 0.01
LCATP04180 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
LCATP04180 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.13■□□□□ 0.01
LCATP04180 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCATP04180 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LCATP04180 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LCATP04180 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCATP04180 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LCATP04180 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCATP04180 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCATP04180 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCATP04180 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms