Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 RARRES2P9-201ENST00000565168 469 ntBASIC10.62□□□□□ -0.71
APOBP04114 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC10.62□□□□□ -0.71
APOBP04114 AC008738.7-201ENST00000609744 511 ntBASIC10.62□□□□□ -0.71
APOBP04114 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 ZNF767P-206ENST00000513792 565 ntBASIC10.61□□□□□ -0.71
APOBP04114 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC10.61□□□□□ -0.71
APOBP04114 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.61□□□□□ -0.71
APOBP04114 CTBP2P3-201ENST00000585629 1255 ntBASIC10.61□□□□□ -0.71
APOBP04114 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC10.61□□□□□ -0.71
APOBP04114 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
APOBP04114 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
APOBP04114 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
APOBP04114 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 REXO1L9P-201ENST00000604264 2108 ntBASIC10.61□□□□□ -0.71
APOBP04114 AL023806.1-201ENST00000603994 1649 ntBASIC10.61□□□□□ -0.71
APOBP04114 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
APOBP04114 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 AC098614.1-201ENST00000368528 745 ntBASIC10.61□□□□□ -0.71
APOBP04114 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.61□□□□□ -0.71
APOBP04114 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.61□□□□□ -0.71
APOBP04114 AC087499.5-201ENST00000452760 1342 ntBASIC10.61□□□□□ -0.71
APOBP04114 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOBP04114 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
APOBP04114 LINC00304-203ENST00000565008 1864 ntBASIC10.6□□□□□ -0.71
APOBP04114 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 BTBD7P1-201ENST00000447253 1453 ntBASIC10.6□□□□□ -0.71
APOBP04114 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC10.6□□□□□ -0.71
APOBP04114 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC10.6□□□□□ -0.71
APOBP04114 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.6□□□□□ -0.71
APOBP04114 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
APOBP04114 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 AC022210.1-201ENST00000449856 793 ntBASIC10.6□□□□□ -0.71
APOBP04114 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC10.6□□□□□ -0.71
APOBP04114 AC007967.4-201ENST00000614700 386 ntBASIC10.6□□□□□ -0.71
APOBP04114 HARS-204ENST00000438307 1789 ntTSL 2 BASIC10.6□□□□□ -0.71
APOBP04114 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
APOBP04114 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
APOBP04114 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 CDC14C-201ENST00000428251 1719 ntBASIC10.6□□□□□ -0.71
APOBP04114 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 FAM86MP-201ENST00000340703 885 ntBASIC10.6□□□□□ -0.71
APOBP04114 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.6□□□□□ -0.71
APOBP04114 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 ELK1P1-201ENST00000485699 580 ntBASIC10.6□□□□□ -0.71
APOBP04114 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC10.6□□□□□ -0.71
APOBP04114 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.6□□□□□ -0.71
APOBP04114 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC10.6□□□□□ -0.71
APOBP04114 SLC22A20-204ENST00000530038 1673 ntBASIC10.6□□□□□ -0.71
APOBP04114 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC10.6□□□□□ -0.71
APOBP04114 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
APOBP04114 AL512638.1-201ENST00000457493 794 ntBASIC10.6□□□□□ -0.71
APOBP04114 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.6□□□□□ -0.71
APOBP04114 FAM8A2P-201ENST00000528813 1142 ntBASIC10.6□□□□□ -0.71
APOBP04114 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.6□□□□□ -0.71
APOBP04114 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC10.6□□□□□ -0.71
APOBP04114 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
APOBP04114 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
APOBP04114 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC10.6□□□□□ -0.71
APOBP04114 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOBP04114 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms