Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TOP3BO95985 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 KRT8P47-201ENST00000604727 1398 ntBASIC17.72■□□□□ 0.43
TOP3BO95985 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.72■□□□□ 0.43
TOP3BO95985 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.72■□□□□ 0.43
TOP3BO95985 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.72■□□□□ 0.43
TOP3BO95985 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TOP3BO95985 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TOP3BO95985 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
TOP3BO95985 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TOP3BO95985 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 HLA-J-201ENST00000462773 1622 ntBASIC17.72■□□□□ 0.43
TOP3BO95985 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP3BO95985 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP3BO95985 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TOP3BO95985 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
TOP3BO95985 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 AL353692.3-201ENST00000407031 1396 ntBASIC17.71■□□□□ 0.43
TOP3BO95985 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.71■□□□□ 0.43
TOP3BO95985 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.71■□□□□ 0.43
TOP3BO95985 KRT18P3-201ENST00000451602 1288 ntBASIC17.71■□□□□ 0.43
TOP3BO95985 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP3BO95985 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP3BO95985 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP3BO95985 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP3BO95985 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.71■□□□□ 0.43
TOP3BO95985 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.71■□□□□ 0.43
TOP3BO95985 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TOP3BO95985 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP3BO95985 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TOP3BO95985 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.7■□□□□ 0.42
TOP3BO95985 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TOP3BO95985 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TOP3BO95985 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.7■□□□□ 0.42
TOP3BO95985 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.7■□□□□ 0.42
TOP3BO95985 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP3BO95985 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.7■□□□□ 0.42
TOP3BO95985 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
TOP3BO95985 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.7■□□□□ 0.42
TOP3BO95985 MTDHP3-201ENST00000594186 672 ntBASIC17.7■□□□□ 0.42
TOP3BO95985 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms