Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.52■□□□□ 0.4
USP1O94782 BX276092.5-203ENST00000456199 560 ntBASIC17.52■□□□□ 0.4
USP1O94782 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.52■□□□□ 0.4
USP1O94782 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.52■□□□□ 0.4
USP1O94782 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.52■□□□□ 0.4
USP1O94782 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.52■□□□□ 0.4
USP1O94782 STK25P1-201ENST00000585406 838 ntBASIC17.52■□□□□ 0.4
USP1O94782 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 AL358472.4-201ENST00000633140 710 ntBASIC17.52■□□□□ 0.4
USP1O94782 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.52■□□□□ 0.4
USP1O94782 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP1O94782 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.52■□□□□ 0.4
USP1O94782 KRT8P10-201ENST00000450021 1447 ntBASIC17.52■□□□□ 0.4
USP1O94782 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP1O94782 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP1O94782 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP1O94782 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.52■□□□□ 0.39
USP1O94782 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP1O94782 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
USP1O94782 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.51■□□□□ 0.39
USP1O94782 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.51■□□□□ 0.39
USP1O94782 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.51■□□□□ 0.39
USP1O94782 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
USP1O94782 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.51■□□□□ 0.39
USP1O94782 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
USP1O94782 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
USP1O94782 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.51■□□□□ 0.39
USP1O94782 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.51■□□□□ 0.39
USP1O94782 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
USP1O94782 VENTXP7-201ENST00000475503 772 ntBASIC17.51■□□□□ 0.39
USP1O94782 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.51■□□□□ 0.39
USP1O94782 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.51■□□□□ 0.39
USP1O94782 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
USP1O94782 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
USP1O94782 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
USP1O94782 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP1O94782 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
USP1O94782 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
USP1O94782 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.5■□□□□ 0.39
USP1O94782 PCDHB19P-201ENST00000570871 2371 ntBASIC17.5■□□□□ 0.39
USP1O94782 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 UPK3BP1-201ENST00000428678 509 ntBASIC17.5■□□□□ 0.39
USP1O94782 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.5■□□□□ 0.39
USP1O94782 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.5■□□□□ 0.39
USP1O94782 AP000550.4-202ENST00000639755 178 ntBASIC17.5■□□□□ 0.39
USP1O94782 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.5■□□□□ 0.39
USP1O94782 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.5■□□□□ 0.39
USP1O94782 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
USP1O94782 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP1O94782 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
USP1O94782 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.5■□□□□ 0.39
USP1O94782 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
USP1O94782 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.5■□□□□ 0.39
USP1O94782 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP1O94782 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms