Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CPNE3O75131 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CPNE3O75131 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CPNE3O75131 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE3O75131 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE3O75131 SIGLEC30P-201ENST00000455569 941 ntBASIC16.62■□□□□ 0.25
CPNE3O75131 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CPNE3O75131 AC109462.3-201ENST00000573934 613 ntBASIC16.62■□□□□ 0.25
CPNE3O75131 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CPNE3O75131 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE3O75131 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE3O75131 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE3O75131 NCF1C-201ENST00000438382 1427 ntBASIC16.62■□□□□ 0.25
CPNE3O75131 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CPNE3O75131 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPNE3O75131 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE3O75131 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.61■□□□□ 0.25
CPNE3O75131 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPNE3O75131 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CPNE3O75131 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPNE3O75131 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE3O75131 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CPNE3O75131 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CPNE3O75131 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CPNE3O75131 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CPNE3O75131 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.6■□□□□ 0.25
CPNE3O75131 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CPNE3O75131 KRT18P3-201ENST00000451602 1288 ntBASIC16.6■□□□□ 0.25
CPNE3O75131 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE3O75131 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.6■□□□□ 0.25
CPNE3O75131 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms