Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.08■□□□□ 0.8
CTNND1O60716 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTNND1O60716 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTNND1O60716 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTNND1O60716 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.08■□□□□ 0.8
CTNND1O60716 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CTNND1O60716 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTNND1O60716 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CTNND1O60716 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNND1O60716 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CTNND1O60716 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNND1O60716 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNND1O60716 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNND1O60716 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.07■□□□□ 0.8
CTNND1O60716 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNND1O60716 KRT8P48-201ENST00000515599 1220 ntBASIC20.07■□□□□ 0.8
CTNND1O60716 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.07■□□□□ 0.8
CTNND1O60716 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.07■□□□□ 0.8
CTNND1O60716 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.07■□□□□ 0.8
CTNND1O60716 AC015911.4-201ENST00000588022 1070 ntBASIC20.07■□□□□ 0.8
CTNND1O60716 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTNND1O60716 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.07■□□□□ 0.8
CTNND1O60716 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNND1O60716 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTNND1O60716 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.07■□□□□ 0.8
CTNND1O60716 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTNND1O60716 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CTNND1O60716 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.06■□□□□ 0.8
CTNND1O60716 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 BCRP1-201ENST00000444246 691 ntBASIC20.06■□□□□ 0.8
CTNND1O60716 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.06■□□□□ 0.8
CTNND1O60716 SPDYE11-202ENST00000450699 704 ntBASIC20.06■□□□□ 0.8
CTNND1O60716 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.06■□□□□ 0.8
CTNND1O60716 SPDYE9P-201ENST00000570642 692 ntBASIC20.06■□□□□ 0.8
CTNND1O60716 SPDYE10P-202ENST00000612005 668 ntBASIC20.06■□□□□ 0.8
CTNND1O60716 SPDYE8P-202ENST00000612377 668 ntBASIC20.06■□□□□ 0.8
CTNND1O60716 LYSMD4-203ENST00000378904 2122 ntBASIC20.06■□□□□ 0.8
CTNND1O60716 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.06■□□□□ 0.8
CTNND1O60716 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CTNND1O60716 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNND1O60716 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNND1O60716 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.05■□□□□ 0.8
CTNND1O60716 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.05■□□□□ 0.8
CTNND1O60716 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.05■□□□□ 0.8
CTNND1O60716 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.05■□□□□ 0.8
CTNND1O60716 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CTNND1O60716 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms