Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS4O43181 SLC25A1P3-201ENST00000395415 828 ntBASIC16.56■□□□□ 0.24
NDUFS4O43181 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.56■□□□□ 0.24
NDUFS4O43181 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.56■□□□□ 0.24
NDUFS4O43181 AC073648.2-201ENST00000510116 352 ntBASIC16.56■□□□□ 0.24
NDUFS4O43181 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.56■□□□□ 0.24
NDUFS4O43181 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.56■□□□□ 0.24
NDUFS4O43181 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.56■□□□□ 0.24
NDUFS4O43181 MTDHP4-201ENST00000600287 670 ntBASIC16.56■□□□□ 0.24
NDUFS4O43181 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.56■□□□□ 0.24
NDUFS4O43181 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS4O43181 TP73-AS1-207ENST00000624167 988 ntBASIC16.56■□□□□ 0.24
NDUFS4O43181 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.56■□□□□ 0.24
NDUFS4O43181 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.56■□□□□ 0.24
NDUFS4O43181 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS4O43181 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NDUFS4O43181 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NDUFS4O43181 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
NDUFS4O43181 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.55■□□□□ 0.24
NDUFS4O43181 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.55■□□□□ 0.24
NDUFS4O43181 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.55■□□□□ 0.24
NDUFS4O43181 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 AC093525.9-201ENST00000624961 1746 ntBASIC16.55■□□□□ 0.24
NDUFS4O43181 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFS4O43181 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.55■□□□□ 0.24
NDUFS4O43181 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
NDUFS4O43181 AP001094.4-201ENST00000579008 2176 ntBASIC16.54■□□□□ 0.24
NDUFS4O43181 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NDUFS4O43181 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
NDUFS4O43181 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.54■□□□□ 0.24
NDUFS4O43181 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.54■□□□□ 0.24
NDUFS4O43181 FAM197Y8-203ENST00000450145 560 ntBASIC16.54■□□□□ 0.24
NDUFS4O43181 PRYP5-201ENST00000451909 266 ntBASIC16.54■□□□□ 0.24
NDUFS4O43181 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.54■□□□□ 0.24
NDUFS4O43181 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 AC021087.4-201ENST00000563761 564 ntBASIC16.54■□□□□ 0.24
NDUFS4O43181 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.54■□□□□ 0.24
NDUFS4O43181 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NDUFS4O43181 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NDUFS4O43181 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NDUFS4O43181 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFS4O43181 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFS4O43181 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NDUFS4O43181 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
NDUFS4O43181 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.53■□□□□ 0.24
NDUFS4O43181 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.53■□□□□ 0.24
NDUFS4O43181 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDUFS4O43181 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms