Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
NDUFA1O15239 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
NDUFA1O15239 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NDUFA1O15239 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.86□□□□□ -0.51
NDUFA1O15239 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.86□□□□□ -0.51
NDUFA1O15239 MIR3917-201ENST00000580971 93 ntBASIC11.86□□□□□ -0.51
NDUFA1O15239 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.86□□□□□ -0.51
NDUFA1O15239 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 PBK-203ENST00000522944 1499 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.86□□□□□ -0.51
NDUFA1O15239 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 LINC01311-201ENST00000565162 1445 ntBASIC11.86□□□□□ -0.51
NDUFA1O15239 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.85□□□□□ -0.51
NDUFA1O15239 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.85□□□□□ -0.51
NDUFA1O15239 AC034232.1-201ENST00000506026 1064 ntBASIC11.85□□□□□ -0.51
NDUFA1O15239 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.85□□□□□ -0.51
NDUFA1O15239 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.85□□□□□ -0.51
NDUFA1O15239 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
NDUFA1O15239 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
NDUFA1O15239 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.85□□□□□ -0.51
NDUFA1O15239 TMEM191A-211ENST00000637163 1067 ntBASIC11.85□□□□□ -0.51
NDUFA1O15239 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.85□□□□□ -0.51
NDUFA1O15239 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NDUFA1O15239 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms