Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN4O14493 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN4O14493 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 PCDHB18P-201ENST00000524813 2368 ntBASIC16.28■□□□□ 0.2
CLDN4O14493 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN4O14493 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN4O14493 AC026396.1-201ENST00000419388 421 ntBASIC16.28■□□□□ 0.2
CLDN4O14493 LINC00982-205ENST00000420957 435 ntBASIC16.28■□□□□ 0.2
CLDN4O14493 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CLDN4O14493 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLDN4O14493 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN4O14493 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN4O14493 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CLDN4O14493 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN4O14493 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN4O14493 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN4O14493 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CLDN4O14493 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN4O14493 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLDN4O14493 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN4O14493 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN4O14493 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN4O14493 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN4O14493 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLDN4O14493 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN4O14493 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN4O14493 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN4O14493 AL031284.1-201ENST00000419297 478 ntBASIC16.27■□□□□ 0.2
CLDN4O14493 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN4O14493 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN4O14493 AP001005.1-201ENST00000571755 1248 ntBASIC16.27■□□□□ 0.2
CLDN4O14493 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.27■□□□□ 0.2
CLDN4O14493 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.27■□□□□ 0.2
CLDN4O14493 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN4O14493 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN4O14493 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
CLDN4O14493 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN4O14493 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN4O14493 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN4O14493 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
CLDN4O14493 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN4O14493 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN4O14493 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN4O14493 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.27■□□□□ 0.19
CLDN4O14493 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN4O14493 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN4O14493 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN4O14493 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN4O14493 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN4O14493 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLDN4O14493 FZD10-202ENST00000539839 3282 ntBASIC16.26■□□□□ 0.19
CLDN4O14493 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN4O14493 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN4O14493 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN4O14493 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN4O14493 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN4O14493 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLDN4O14493 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN4O14493 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 AL139424.1-201ENST00000607572 797 ntBASIC16.26■□□□□ 0.19
CLDN4O14493 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 MIR1199-201ENST00000621445 119 ntBASIC16.26■□□□□ 0.19
CLDN4O14493 AC008735.5-201ENST00000623544 497 ntBASIC16.26■□□□□ 0.19
CLDN4O14493 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CLDN4O14493 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms