Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.27■□□□□ 0.36
C1QTNF3-AMACRE9PGA6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C1QTNF3-AMACRE9PGA6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.27■□□□□ 0.36
C1QTNF3-AMACRE9PGA6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.27■□□□□ 0.36
C1QTNF3-AMACRE9PGA6 AL691403.2-201ENST00000618460 490 ntBASIC17.27■□□□□ 0.36
C1QTNF3-AMACRE9PGA6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC023141.13-201ENST00000604991 943 ntBASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC004877.2-201ENST00000623941 599 ntBASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC079781.4-201ENST00000641908 219 ntBASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC092865.6-201ENST00000642101 219 ntBASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 GNAS-203ENST00000306120 1878 ntBASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.26■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RHOQP3-201ENST00000437982 621 ntBASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC087163.2-201ENST00000457299 853 ntBASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AL513190.1-201ENST00000621254 727 ntBASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC016396.2-201ENST00000562575 1417 ntBASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 KRT19P2-202ENST00000557173 1012 ntBASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 PDPK2P-202ENST00000562415 1191 ntBASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.24■□□□□ 0.35
C1QTNF3-AMACRE9PGA6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms