Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TBC1D3BA6NDS4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 AC129492.6-201ENST00000611383 1305 ntBASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 AP002472.1-201ENST00000577490 586 ntBASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 AC068137.2-201ENST00000605408 478 ntBASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 LINC00304-203ENST00000565008 1864 ntBASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TBC1D3BA6NDS4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 LYSMD4-203ENST00000378904 2122 ntBASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 AC087163.2-201ENST00000457299 853 ntBASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 SLC25A6P2-201ENST00000497974 877 ntBASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 ACTL9-202ENST00000612068 1252 ntBASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3BA6NDS4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 AC092902.6-201ENST00000641783 218 ntBASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3BA6NDS4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms