Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 MIR1233-2-201ENST00000408138 82 ntBASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 MIR1233-1-201ENST00000408722 82 ntBASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 AC092910.1-201ENST00000482027 1129 ntBASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 PGAM5P1-201ENST00000518923 814 ntBASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 AC012640.2-201ENST00000561606 901 ntBASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 AC034105.1-201ENST00000563488 319 ntBASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA6Q9Y5G7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 NKILA-202ENST00000614771 2598 ntBASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 MIR940-201ENST00000401276 94 ntBASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 LAGE3P1-201ENST00000425356 484 ntBASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 AC105339.3-201ENST00000560043 636 ntBASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 Z83851.2-201ENST00000609564 659 ntBASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 AC073592.4-201ENST00000623827 446 ntBASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA6Q9Y5G7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 AC079776.2-201ENST00000641154 1609 ntBASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 RNA5SP415-201ENST00000517246 115 ntBASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 KRT18P55-202ENST00000578578 1546 ntBASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA6Q9Y5G7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms