Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 AC064836.3-201ENST00000607928 673 ntBASIC16.97■□□□□ 0.31
SATB2Q9UPW6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
SATB2Q9UPW6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 NOC2LP2-201ENST00000407594 1944 ntBASIC16.96■□□□□ 0.31
SATB2Q9UPW6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 AC211486.1-202ENST00000416371 468 ntBASIC16.96■□□□□ 0.31
SATB2Q9UPW6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 SLC25A6P5-201ENST00000435663 894 ntBASIC16.96■□□□□ 0.31
SATB2Q9UPW6 AC211476.1-201ENST00000503899 468 ntBASIC16.96■□□□□ 0.31
SATB2Q9UPW6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 AC006557.2-201ENST00000592985 1240 ntBASIC16.96■□□□□ 0.31
SATB2Q9UPW6 LINC02084-201ENST00000606069 1096 ntBASIC16.96■□□□□ 0.31
SATB2Q9UPW6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 AL096828.2-201ENST00000567259 1965 ntBASIC16.96■□□□□ 0.31
SATB2Q9UPW6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SATB2Q9UPW6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 AC138028.4-201ENST00000564984 1845 ntBASIC16.96■□□□□ 0.3
SATB2Q9UPW6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 FLJ13224-201ENST00000313737 1514 ntBASIC16.96■□□□□ 0.3
SATB2Q9UPW6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SATB2Q9UPW6 AC097374.2-201ENST00000618617 1306 ntBASIC16.96■□□□□ 0.3
SATB2Q9UPW6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.95■□□□□ 0.3
SATB2Q9UPW6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 AC108751.1-201ENST00000490852 363 ntBASIC16.95■□□□□ 0.3
SATB2Q9UPW6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.95■□□□□ 0.3
SATB2Q9UPW6 AC004817.3-201ENST00000602957 2129 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms