Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 FAAHP1-202ENST00000446499 1238 ntBASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 EMBP1-201ENST00000458200 901 ntBASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 AF238378.1-201ENST00000526806 358 ntBASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 MTDHP3-201ENST00000594186 672 ntBASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 AC008608.2-201ENST00000606089 416 ntBASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 AC079776.2-201ENST00000641154 1609 ntBASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
PPARGC1AQ9UBK2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 PP12613-201ENST00000424958 2230 ntBASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 AC004870.1-201ENST00000315132 882 ntBASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 SPDYE21P-201ENST00000413323 827 ntBASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 FGFR3P6-201ENST00000457012 610 ntBASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PPARGC1AQ9UBK2 AD000864.1-201ENST00000624076 2295 ntBASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 KLF4P1-201ENST00000412782 1185 ntBASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 AL020989.1-201ENST00000422979 469 ntBASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 STK19B-204ENST00000512515 211 ntBASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 AC141586.5-201ENST00000624546 2050 ntBASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 TNRC18P3-201ENST00000441896 2691 ntBASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.03■□□□□ 0.48
PPARGC1AQ9UBK2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms