Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 AP002414.1-201ENST00000391405 1147 ntBASIC17.9■□□□□ 0.46
HPS4Q9NQG7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 AL078644.1-201ENST00000609881 752 ntBASIC17.9■□□□□ 0.46
HPS4Q9NQG7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 AC010507.1-201ENST00000633895 436 ntBASIC17.9■□□□□ 0.46
HPS4Q9NQG7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HPS4Q9NQG7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HPS4Q9NQG7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.89■□□□□ 0.46
HPS4Q9NQG7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 HTR5BP-201ENST00000430851 1154 ntBASIC17.89■□□□□ 0.45
HPS4Q9NQG7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 OR6D1P-202ENST00000641007 5290 ntBASIC17.89■□□□□ 0.45
HPS4Q9NQG7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.89■□□□□ 0.45
HPS4Q9NQG7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.88■□□□□ 0.45
HPS4Q9NQG7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
HPS4Q9NQG7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms