Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GCM1Q9NP62 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GCM1Q9NP62 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GCM1Q9NP62 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GCM1Q9NP62 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GCM1Q9NP62 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GCM1Q9NP62 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 FGFR3P6-201ENST00000457012 610 ntBASIC14.81□□□□□ -0.04
GCM1Q9NP62 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 STK25P1-201ENST00000585406 838 ntBASIC14.81□□□□□ -0.04
GCM1Q9NP62 AL121894.2-201ENST00000602977 491 ntBASIC14.81□□□□□ -0.04
GCM1Q9NP62 AL031008.1-201ENST00000619963 541 ntBASIC14.81□□□□□ -0.04
GCM1Q9NP62 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.81□□□□□ -0.04
GCM1Q9NP62 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GCM1Q9NP62 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.81□□□□□ -0.04
GCM1Q9NP62 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 AC003669.1-201ENST00000334569 611 ntBASIC14.8□□□□□ -0.04
GCM1Q9NP62 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 KLF4P1-201ENST00000412782 1185 ntBASIC14.8□□□□□ -0.04
GCM1Q9NP62 AC079781.3-201ENST00000449110 356 ntBASIC14.8□□□□□ -0.04
GCM1Q9NP62 SCARNA2-201ENST00000458748 420 ntBASIC14.8□□□□□ -0.04
GCM1Q9NP62 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 AC079776.2-201ENST00000641154 1609 ntBASIC14.8□□□□□ -0.04
GCM1Q9NP62 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 AL356309.3-201ENST00000624132 1934 ntBASIC14.8□□□□□ -0.04
GCM1Q9NP62 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.8□□□□□ -0.04
GCM1Q9NP62 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GCM1Q9NP62 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 AC007326.2-201ENST00000624224 7579 ntBASIC14.79□□□□□ -0.04
GCM1Q9NP62 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms