Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 SPCS2P2-201ENST00000603270 608 ntBASIC15.86■□□□□ 0.13
CHD8Q9HCK8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 STK19B-204ENST00000512515 211 ntBASIC15.85■□□□□ 0.13
CHD8Q9HCK8 TPRX2P-201ENST00000535362 881 ntBASIC15.85■□□□□ 0.13
CHD8Q9HCK8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 AC105129.2-201ENST00000559536 390 ntBASIC15.85■□□□□ 0.13
CHD8Q9HCK8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 AC093484.2-201ENST00000580996 2166 ntBASIC15.85■□□□□ 0.13
CHD8Q9HCK8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 AC099336.1-201ENST00000417053 1171 ntBASIC15.85■□□□□ 0.13
CHD8Q9HCK8 HINT2P1-201ENST00000419438 481 ntBASIC15.85■□□□□ 0.13
CHD8Q9HCK8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.85■□□□□ 0.13
CHD8Q9HCK8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 AC108725.1-201ENST00000495472 409 ntBASIC15.84■□□□□ 0.13
CHD8Q9HCK8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 FO681548.1-201ENST00000455617 1132 ntBASIC15.84■□□□□ 0.13
CHD8Q9HCK8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 AL589739.1-201ENST00000607720 493 ntBASIC15.84■□□□□ 0.13
CHD8Q9HCK8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHD8Q9HCK8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 AL355334.1-201ENST00000417713 215 ntBASIC15.83■□□□□ 0.13
CHD8Q9HCK8 RPL7P3-201ENST00000441388 714 ntBASIC15.83■□□□□ 0.13
CHD8Q9HCK8 CSF2RBP1-201ENST00000447905 391 ntBASIC15.83■□□□□ 0.13
CHD8Q9HCK8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHD8Q9HCK8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms