Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 AP002414.1-201ENST00000391405 1147 ntBASIC20.37■□□□□ 0.85
RNF41Q9H4P4 RPS15P9-201ENST00000494093 319 ntBASIC20.37■□□□□ 0.85
RNF41Q9H4P4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF41Q9H4P4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 PTCHD3P3-201ENST00000403073 906 ntBASIC20.36■□□□□ 0.85
RNF41Q9H4P4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 AC098831.1-202ENST00000438821 336 ntBASIC20.36■□□□□ 0.85
RNF41Q9H4P4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 BX640515.1-201ENST00000617215 977 ntBASIC20.36■□□□□ 0.85
RNF41Q9H4P4 AC117500.6-201ENST00000624871 588 ntBASIC20.36■□□□□ 0.85
RNF41Q9H4P4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF41Q9H4P4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.35■□□□□ 0.85
RNF41Q9H4P4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF41Q9H4P4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 AL590627.1-203ENST00000421194 1026 ntBASIC20.34■□□□□ 0.85
RNF41Q9H4P4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 IGHV3-22-201ENST00000520721 359 ntBASIC20.34■□□□□ 0.85
RNF41Q9H4P4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 TERC-201ENST00000602385 541 ntBASIC20.34■□□□□ 0.85
RNF41Q9H4P4 AC008667.4-201ENST00000607370 168 ntBASIC20.34■□□□□ 0.85
RNF41Q9H4P4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 AC139713.2-201ENST00000641328 2723 ntBASIC20.34■□□□□ 0.85
RNF41Q9H4P4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF41Q9H4P4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms