Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 FAM185BP-201ENST00000443595 716 ntBASIC18.59■□□□□ 0.57
NXF3Q9H4D5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 AC005829.1-201ENST00000570002 483 ntBASIC18.59■□□□□ 0.57
NXF3Q9H4D5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 AC023141.13-201ENST00000604991 943 ntBASIC18.59■□□□□ 0.57
NXF3Q9H4D5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 C20orf181-201ENST00000623918 480 ntBASIC18.59■□□□□ 0.57
NXF3Q9H4D5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NXF3Q9H4D5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NXF3Q9H4D5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NXF3Q9H4D5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NXF3Q9H4D5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NXF3Q9H4D5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
NXF3Q9H4D5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NXF3Q9H4D5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.58■□□□□ 0.57
NXF3Q9H4D5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 SLC25A1P3-201ENST00000395415 828 ntBASIC18.58■□□□□ 0.56
NXF3Q9H4D5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 MIR4469-201ENST00000583919 79 ntBASIC18.58■□□□□ 0.56
NXF3Q9H4D5 AP001160.2-201ENST00000596071 487 ntBASIC18.58■□□□□ 0.56
NXF3Q9H4D5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NXF3Q9H4D5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 HTR5BP-201ENST00000430851 1154 ntBASIC18.57■□□□□ 0.56
NXF3Q9H4D5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 YBX1P5-201ENST00000509441 847 ntBASIC18.57■□□□□ 0.56
NXF3Q9H4D5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 AC107918.2-201ENST00000530817 355 ntBASIC18.57■□□□□ 0.56
NXF3Q9H4D5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.57■□□□□ 0.56
NXF3Q9H4D5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms