Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 AC009533.2-201ENST00000543664 586 ntBASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 AC111152.3-201ENST00000569699 673 ntBASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF3BQ9BZI7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UPF3BQ9BZI7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 DRAXINP1-201ENST00000437611 948 ntBASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 VENTXP7-201ENST00000475503 772 ntBASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 BNIP3P18-201ENST00000593976 575 ntBASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 RNF216P1-203ENST00000404404 2427 ntBASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 AL135999.2-201ENST00000622438 1686 ntBASIC20.64■□□□□ 0.89
UPF3BQ9BZI7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 HCG4P8-203ENST00000443049 980 ntBASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 LINC00265-3P-201ENST00000447588 903 ntBASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF3BQ9BZI7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UPF3BQ9BZI7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms