Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 BID-212ENST00000614949 1988 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 KRT18P24-201ENST00000344739 1156 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 Y_RNA.509-201ENST00000384506 99 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 MT-TD-201ENST00000387419 68 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 CHMP1B2P-201ENST00000399581 597 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 TIMD4-202ENST00000406964 581 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 MIR1277-201ENST00000408536 78 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AL161631.1-201ENST00000417933 486 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AL355310.1-201ENST00000436416 596 ntTSL 3 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AL450326.1-201ENST00000442526 760 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AL583843.1-201ENST00000456070 346 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC008443.5-202ENST00000508877 392 ntTSL 3 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC010285.3-201ENST00000511668 676 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC087441.1-201ENST00000531069 301 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 OR4A41P-201ENST00000533053 928 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 DUX4L18-201ENST00000553347 1267 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 LINC02328-201ENST00000553668 741 ntTSL 3 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC007151.1-201ENST00000572774 483 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 MIR4281-201ENST00000580852 62 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 THA1P-201ENST00000590384 1145 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC018618.2-201ENST00000604770 446 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC005740.4-201ENST00000607378 957 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AL022324.3-201ENST00000609330 747 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC008759.3-201ENST00000613300 508 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 UBE2Q2P2-203ENST00000613592 761 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 SPRY4-IT1-201ENST00000630558 703 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC090897.3-201ENST00000636973 1157 ntBASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
KRTAP3-3Q9BYR6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AL162456.1-201ENST00000634535 2006 ntBASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 TAAR6-201ENST00000275198 1038 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AC106795.2-203ENST00000366189 511 ntTSL 5 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AL590002.1-201ENST00000406554 418 ntBASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AC096533.1-201ENST00000411645 353 ntBASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 DNAJA1P2-201ENST00000421360 1197 ntBASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 KCTD9P1-201ENST00000430462 1167 ntBASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AL392172.1-205ENST00000435378 768 ntTSL 5 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 AC002456.1-202ENST00000441971 450 ntTSL 2 BASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 MTND1P9-201ENST00000453775 944 ntBASIC10.87□□□□□ -0.67
KRTAP3-3Q9BYR6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms