Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
UPK3BQ9BT76 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
UPK3BQ9BT76 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
UPK3BQ9BT76 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.08□□□□□ -0.47
UPK3BQ9BT76 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
UPK3BQ9BT76 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
UPK3BQ9BT76 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
UPK3BQ9BT76 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 MRPL3P1-201ENST00000400109 1033 ntBASIC12.08□□□□□ -0.48
UPK3BQ9BT76 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 REXO1L9P-201ENST00000604264 2108 ntBASIC12.08□□□□□ -0.48
UPK3BQ9BT76 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 PCDHA12-202ENST00000613593 2588 ntBASIC12.08□□□□□ -0.48
UPK3BQ9BT76 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 AL353593.2-201ENST00000602529 1483 ntBASIC12.08□□□□□ -0.48
UPK3BQ9BT76 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UPK3BQ9BT76 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 AL031284.1-201ENST00000419297 478 ntBASIC12.07□□□□□ -0.48
UPK3BQ9BT76 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 RNPS1P1-201ENST00000507437 918 ntBASIC12.07□□□□□ -0.48
UPK3BQ9BT76 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms