Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AP002469.2-201ENST00000531724 424 ntBASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 AC104692.2-201ENST00000603054 253 ntBASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 AD000864.1-201ENST00000624076 2295 ntBASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF1Q9BSM1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AL391005.1-201ENST00000623953 2435 ntBASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 MTDHP3-201ENST00000594186 672 ntBASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AL645608.8-201ENST00000606034 2086 ntBASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 AC006116.8-202ENST00000587620 1550 ntBASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCGF1Q9BSM1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.55□□□□□ -0.08
PCGF1Q9BSM1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms