Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMOQ99835 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMOQ99835 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMOQ99835 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SMOQ99835 KRT18P2-201ENST00000447938 1258 ntBASIC18.08■□□□□ 0.48
SMOQ99835 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.08■□□□□ 0.48
SMOQ99835 AC064836.3-201ENST00000607928 673 ntBASIC18.08■□□□□ 0.48
SMOQ99835 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.08■□□□□ 0.48
SMOQ99835 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.08■□□□□ 0.48
SMOQ99835 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.08■□□□□ 0.48
SMOQ99835 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMOQ99835 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SMOQ99835 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMOQ99835 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMOQ99835 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.07■□□□□ 0.48
SMOQ99835 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMOQ99835 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.07■□□□□ 0.48
SMOQ99835 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.07■□□□□ 0.48
SMOQ99835 CRYGEP-201ENST00000412192 528 ntBASIC18.07■□□□□ 0.48
SMOQ99835 IGLL3P-201ENST00000412472 434 ntBASIC18.07■□□□□ 0.48
SMOQ99835 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.07■□□□□ 0.48
SMOQ99835 AL591424.1-201ENST00000442569 1213 ntBASIC18.07■□□□□ 0.48
SMOQ99835 HCG4B-203ENST00000450128 991 ntBASIC18.07■□□□□ 0.48
SMOQ99835 KRT18P3-201ENST00000451602 1288 ntBASIC18.07■□□□□ 0.48
SMOQ99835 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
SMOQ99835 AC087163.2-201ENST00000457299 853 ntBASIC18.07■□□□□ 0.48
SMOQ99835 SLC25A6P2-201ENST00000497974 877 ntBASIC18.07■□□□□ 0.48
SMOQ99835 PGAM5P1-201ENST00000518923 814 ntBASIC18.07■□□□□ 0.48
SMOQ99835 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.07■□□□□ 0.48
SMOQ99835 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.07■□□□□ 0.48
SMOQ99835 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.07■□□□□ 0.48
SMOQ99835 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.07■□□□□ 0.48
SMOQ99835 AC010654.1-201ENST00000615722 808 ntBASIC18.07■□□□□ 0.48
SMOQ99835 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SMOQ99835 FZD10-202ENST00000539839 3282 ntBASIC18.07■□□□□ 0.48
SMOQ99835 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMOQ99835 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SMOQ99835 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.06■□□□□ 0.48
SMOQ99835 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.06■□□□□ 0.48
SMOQ99835 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.06■□□□□ 0.48
SMOQ99835 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.06■□□□□ 0.48
SMOQ99835 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.06■□□□□ 0.48
SMOQ99835 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.06■□□□□ 0.48
SMOQ99835 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.06■□□□□ 0.48
SMOQ99835 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.06■□□□□ 0.48
SMOQ99835 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.06■□□□□ 0.48
SMOQ99835 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.06■□□□□ 0.48
SMOQ99835 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.06■□□□□ 0.48
SMOQ99835 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.06■□□□□ 0.48
SMOQ99835 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMOQ99835 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.05■□□□□ 0.48
SMOQ99835 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.05■□□□□ 0.48
SMOQ99835 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms