Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 AC099343.3-201ENST00000605834 2503 ntBASIC13.14□□□□□ -0.31
AP1S3Q96PC3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP1S3Q96PC3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 CROCCP2-202ENST00000412962 2773 ntBASIC13.13□□□□□ -0.31
AP1S3Q96PC3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 AC036111.1-201ENST00000533973 1582 ntBASIC13.13□□□□□ -0.31
AP1S3Q96PC3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 MFAP1P1-201ENST00000442257 1255 ntBASIC13.13□□□□□ -0.31
AP1S3Q96PC3 CA15P1-201ENST00000481698 905 ntBASIC13.13□□□□□ -0.31
AP1S3Q96PC3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 RARRES2P10-201ENST00000564312 460 ntBASIC13.13□□□□□ -0.31
AP1S3Q96PC3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 PP12613-201ENST00000424958 2230 ntBASIC13.13□□□□□ -0.31
AP1S3Q96PC3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 HOXB1-202ENST00000577092 1414 ntBASIC13.13□□□□□ -0.31
AP1S3Q96PC3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP1S3Q96PC3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 AL138688.1-201ENST00000624851 1594 ntBASIC13.12□□□□□ -0.31
AP1S3Q96PC3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms