Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.32■□□□□ 0.52
CALR3Q96L12 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.32■□□□□ 0.52
CALR3Q96L12 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CALR3Q96L12 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.32■□□□□ 0.52
CALR3Q96L12 AC009533.2-201ENST00000543664 586 ntBASIC18.32■□□□□ 0.52
CALR3Q96L12 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 AC011840.4-201ENST00000578471 627 ntBASIC18.32■□□□□ 0.52
CALR3Q96L12 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.32■□□□□ 0.52
CALR3Q96L12 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.32■□□□□ 0.52
CALR3Q96L12 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.32■□□□□ 0.52
CALR3Q96L12 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.31■□□□□ 0.52
CALR3Q96L12 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.31■□□□□ 0.52
CALR3Q96L12 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 LINC01238-205ENST00000567549 1107 ntBASIC18.31■□□□□ 0.52
CALR3Q96L12 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.31■□□□□ 0.52
CALR3Q96L12 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.31■□□□□ 0.52
CALR3Q96L12 DOC2GP-204ENST00000639052 2548 ntBASIC18.31■□□□□ 0.52
CALR3Q96L12 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.31■□□□□ 0.52
CALR3Q96L12 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALR3Q96L12 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.3■□□□□ 0.52
CALR3Q96L12 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CALR3Q96L12 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.3■□□□□ 0.52
CALR3Q96L12 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.3■□□□□ 0.52
CALR3Q96L12 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CALR3Q96L12 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.3■□□□□ 0.52
CALR3Q96L12 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.3■□□□□ 0.52
CALR3Q96L12 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.3■□□□□ 0.52
CALR3Q96L12 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.3■□□□□ 0.52
CALR3Q96L12 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.3■□□□□ 0.52
CALR3Q96L12 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.3■□□□□ 0.52
CALR3Q96L12 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CALR3Q96L12 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CALR3Q96L12 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.29■□□□□ 0.52
CALR3Q96L12 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms