Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 AL845331.1-201ENST00000424978 1190 ntBASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 KRT18P57-201ENST00000443599 1254 ntBASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CHAMP1Q96JM3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.08■□□□□ 0.8
CHAMP1Q96JM3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 AC026691.1-201ENST00000602502 2017 ntBASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 AC002558.1-201ENST00000488906 803 ntBASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 AL121894.2-201ENST00000602977 491 ntBASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 AC005363.2-201ENST00000618631 242 ntBASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 AC006011.2-201ENST00000621313 1158 ntBASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHAMP1Q96JM3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 AC138932.1-201ENST00000534164 6830 ntBASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 AC112907.2-201ENST00000448639 330 ntBASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHAMP1Q96JM3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 ATP5G1P1-201ENST00000448724 379 ntBASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 AC087388.1-201ENST00000571370 1112 ntBASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms