Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 AC068418.2-201ENST00000577309 3703 ntBASIC15.57■□□□□ 0.08
PTP4A1Q93096 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 IGHV3-52-201ENST00000519770 353 ntBASIC15.57■□□□□ 0.08
PTP4A1Q93096 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 AC078925.2-201ENST00000624013 1973 ntBASIC15.56■□□□□ 0.08
PTP4A1Q93096 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 AC087388.1-201ENST00000571370 1112 ntBASIC15.56■□□□□ 0.08
PTP4A1Q93096 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 AL049757.1-201ENST00000616842 1596 ntBASIC15.56■□□□□ 0.08
PTP4A1Q93096 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 PCDH8P1-201ENST00000428983 2773 ntBASIC15.56■□□□□ 0.08
PTP4A1Q93096 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PTP4A1Q93096 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTP4A1Q93096 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 AL603756.1-201ENST00000606511 2163 ntBASIC15.55■□□□□ 0.08
PTP4A1Q93096 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 SPDYE13P-201ENST00000445314 798 ntBASIC15.55■□□□□ 0.08
PTP4A1Q93096 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 AC092171.3-201ENST00000610122 2651 ntBASIC15.55■□□□□ 0.08
PTP4A1Q93096 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PTP4A1Q93096 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTP4A1Q93096 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTP4A1Q93096 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.54■□□□□ 0.08
PTP4A1Q93096 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms