Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
DDX1Q92499 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DDX1Q92499 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DDX1Q92499 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX1Q92499 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.4■□□□□ 0.54
DDX1Q92499 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX1Q92499 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DDX1Q92499 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DDX1Q92499 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DDX1Q92499 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DDX1Q92499 AC011676.5-201ENST00000624864 2660 ntBASIC18.4■□□□□ 0.54
DDX1Q92499 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
DDX1Q92499 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.54
DDX1Q92499 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
DDX1Q92499 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DDX1Q92499 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX1Q92499 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DDX1Q92499 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
DDX1Q92499 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
DDX1Q92499 AC106886.4-201ENST00000623557 2502 ntBASIC18.39■□□□□ 0.53
DDX1Q92499 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
DDX1Q92499 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
DDX1Q92499 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX1Q92499 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.39■□□□□ 0.53
DDX1Q92499 SIGLEC30P-201ENST00000455569 941 ntBASIC18.39■□□□□ 0.53
DDX1Q92499 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.39■□□□□ 0.53
DDX1Q92499 AC124947.2-201ENST00000547118 1133 ntBASIC18.39■□□□□ 0.53
DDX1Q92499 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
DDX1Q92499 AL355385.1-201ENST00000606123 409 ntBASIC18.39■□□□□ 0.53
DDX1Q92499 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.39■□□□□ 0.53
DDX1Q92499 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
DDX1Q92499 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX1Q92499 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX1Q92499 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
DDX1Q92499 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX1Q92499 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
DDX1Q92499 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.38■□□□□ 0.53
DDX1Q92499 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX1Q92499 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX1Q92499 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX1Q92499 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX1Q92499 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX1Q92499 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 AC106730.1-201ENST00000566722 1090 ntBASIC18.38■□□□□ 0.53
DDX1Q92499 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX1Q92499 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX1Q92499 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX1Q92499 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
DDX1Q92499 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 AC105020.1-201ENST00000435356 2205 ntBASIC18.38■□□□□ 0.53
DDX1Q92499 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDX1Q92499 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX1Q92499 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX1Q92499 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX1Q92499 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX1Q92499 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX1Q92499 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX1Q92499 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms