Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.98■□□□□ 0.79
CCDC12Q8WUD4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 NCF1C-201ENST00000438382 1427 ntBASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 FAM197Y8-203ENST00000450145 560 ntBASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 AL160237.2-201ENST00000556165 472 ntBASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 AC021087.4-201ENST00000563761 564 ntBASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 AL589182.2-201ENST00000619332 1049 ntBASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC12Q8WUD4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 AC004817.3-201ENST00000602957 2129 ntBASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 AC097637.2-201ENST00000624096 1997 ntBASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 TP73-AS1-207ENST00000624167 988 ntBASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC12Q8WUD4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 KRT18P67-201ENST00000432816 1264 ntBASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 RNPS1P1-201ENST00000507437 918 ntBASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 AP002469.2-201ENST00000531724 424 ntBASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CCDC12Q8WUD4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms