Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 AL031008.1-201ENST00000619963 541 ntBASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 TP73-AS1-207ENST00000624167 988 ntBASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC148Q8NFR7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 AL589182.2-201ENST00000619332 1049 ntBASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC148Q8NFR7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 AC025062.2-201ENST00000605477 670 ntBASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC148Q8NFR7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 LINC00982-205ENST00000420957 435 ntBASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 KRT18P67-201ENST00000432816 1264 ntBASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 FAM197Y8-203ENST00000450145 560 ntBASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 AF186996.4-201ENST00000467186 377 ntBASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms