Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SIX5Q8N196 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SIX5Q8N196 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 AC116562.4-201ENST00000641316 2276 ntBASIC17.67■□□□□ 0.42
SIX5Q8N196 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 KRT18P32-201ENST00000424695 1287 ntBASIC17.67■□□□□ 0.42
SIX5Q8N196 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SIX5Q8N196 KLF2P3-201ENST00000451977 1087 ntBASIC17.67■□□□□ 0.42
SIX5Q8N196 UGT1A2P-201ENST00000454886 866 ntBASIC17.67■□□□□ 0.42
SIX5Q8N196 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 AC069335.1-201ENST00000489972 472 ntBASIC17.67■□□□□ 0.42
SIX5Q8N196 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.67■□□□□ 0.42
SIX5Q8N196 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX5Q8N196 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.67■□□□□ 0.42
SIX5Q8N196 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX5Q8N196 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX5Q8N196 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SIX5Q8N196 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SIX5Q8N196 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX5Q8N196 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX5Q8N196 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX5Q8N196 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.67■□□□□ 0.42
SIX5Q8N196 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SIX5Q8N196 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX5Q8N196 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX5Q8N196 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SIX5Q8N196 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX5Q8N196 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX5Q8N196 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX5Q8N196 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.66■□□□□ 0.42
SIX5Q8N196 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX5Q8N196 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX5Q8N196 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX5Q8N196 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX5Q8N196 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
SIX5Q8N196 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 AC126763.1-201ENST00000552015 2118 ntBASIC17.66■□□□□ 0.42
SIX5Q8N196 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SIX5Q8N196 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SIX5Q8N196 AC020916.1-201ENST00000587762 1774 ntBASIC17.66■□□□□ 0.42
SIX5Q8N196 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX5Q8N196 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX5Q8N196 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SIX5Q8N196 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX5Q8N196 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX5Q8N196 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SIX5Q8N196 AC107890.1-201ENST00000422478 521 ntBASIC17.65■□□□□ 0.42
SIX5Q8N196 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX5Q8N196 AC007274.1-201ENST00000439805 662 ntBASIC17.65■□□□□ 0.42
SIX5Q8N196 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX5Q8N196 AC125807.1-201ENST00000483097 614 ntBASIC17.65■□□□□ 0.42
SIX5Q8N196 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX5Q8N196 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX5Q8N196 AC099522.2-201ENST00000607001 744 ntBASIC17.65■□□□□ 0.42
SIX5Q8N196 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX5Q8N196 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SIX5Q8N196 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX5Q8N196 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX5Q8N196 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms