Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 BX005266.1-201ENST00000473402 457 ntBASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 SART3-203ENST00000546611 1184 ntBASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 AL031008.1-201ENST00000619963 541 ntBASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDLRAP1Q5SW96 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 AC079781.3-201ENST00000449110 356 ntBASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 AC073648.2-201ENST00000510116 352 ntBASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 AC148477.5-201ENST00000625164 1645 ntBASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.24■□□□□ 0.35
LDLRAP1Q5SW96 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 AC064862.7-201ENST00000604520 867 ntBASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDLRAP1Q5SW96 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDLRAP1Q5SW96 AC016396.2-201ENST00000562575 1417 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms