Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KHDC1Q4VXA5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 AC009533.2-201ENST00000543664 586 ntBASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 KRT126P-201ENST00000549467 1181 ntBASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 AC008741.2-201ENST00000612792 3115 ntBASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 OR6D1P-202ENST00000641007 5290 ntBASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 INTS4P1-201ENST00000438455 1935 ntBASIC17.55■□□□□ 0.4
KHDC1Q4VXA5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 CROCCP2-202ENST00000412962 2773 ntBASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 MIR5100-201ENST00000579544 119 ntBASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KHDC1Q4VXA5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 FLJ38576-201ENST00000623820 2459 ntBASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 POM121L3P-201ENST00000419331 1163 ntBASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 IFNL4P1-201ENST00000607083 540 ntBASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KHDC1Q4VXA5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KHDC1Q4VXA5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms