Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 MTDHP4-201ENST00000600287 670 ntBASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 AL353135.1-201ENST00000606729 504 ntBASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN20Q4JDL3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 SCARNA2-201ENST00000458748 420 ntBASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 KRT126P-201ENST00000549467 1181 ntBASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 RN7SL510P-201ENST00000581311 263 ntBASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
PTPN20Q4JDL3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 NCF1C-201ENST00000438382 1427 ntBASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 AC079781.3-201ENST00000449110 356 ntBASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN20Q4JDL3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 GPR89P-201ENST00000407924 1495 ntBASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms