Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USH1GQ495M9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
USH1GQ495M9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
USH1GQ495M9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USH1GQ495M9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 YBX2P1-201ENST00000394192 760 ntBASIC19.82■□□□□ 0.76
USH1GQ495M9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 IGLL3P-201ENST00000412472 434 ntBASIC19.82■□□□□ 0.76
USH1GQ495M9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.82■□□□□ 0.76
USH1GQ495M9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.82■□□□□ 0.76
USH1GQ495M9 OR7E47P-204ENST00000575924 449 ntBASIC19.82■□□□□ 0.76
USH1GQ495M9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.82■□□□□ 0.76
USH1GQ495M9 AC010654.1-201ENST00000615722 808 ntBASIC19.82■□□□□ 0.76
USH1GQ495M9 GGTLC5P-201ENST00000617623 998 ntBASIC19.82■□□□□ 0.76
USH1GQ495M9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.82■□□□□ 0.76
USH1GQ495M9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USH1GQ495M9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.82■□□□□ 0.76
USH1GQ495M9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
USH1GQ495M9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.82■□□□□ 0.76
USH1GQ495M9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USH1GQ495M9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USH1GQ495M9 GNAS-203ENST00000306120 1878 ntBASIC19.82■□□□□ 0.76
USH1GQ495M9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USH1GQ495M9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.81■□□□□ 0.76
USH1GQ495M9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USH1GQ495M9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
USH1GQ495M9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USH1GQ495M9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.81■□□□□ 0.76
USH1GQ495M9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
USH1GQ495M9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.81■□□□□ 0.76
USH1GQ495M9 AC002347.1-201ENST00000569543 541 ntBASIC19.81■□□□□ 0.76
USH1GQ495M9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.81■□□□□ 0.76
USH1GQ495M9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.81■□□□□ 0.76
USH1GQ495M9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USH1GQ495M9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
USH1GQ495M9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.81■□□□□ 0.76
USH1GQ495M9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.81■□□□□ 0.76
USH1GQ495M9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
USH1GQ495M9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
USH1GQ495M9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
USH1GQ495M9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USH1GQ495M9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.81■□□□□ 0.76
USH1GQ495M9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USH1GQ495M9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USH1GQ495M9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
USH1GQ495M9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
USH1GQ495M9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
USH1GQ495M9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.8■□□□□ 0.76
USH1GQ495M9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.8■□□□□ 0.76
USH1GQ495M9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.8■□□□□ 0.76
USH1GQ495M9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 AC092865.6-201ENST00000642101 219 ntBASIC19.8■□□□□ 0.76
USH1GQ495M9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 NOC2LP2-201ENST00000407594 1944 ntBASIC19.8■□□□□ 0.76
USH1GQ495M9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.8■□□□□ 0.76
USH1GQ495M9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USH1GQ495M9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
USH1GQ495M9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USH1GQ495M9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USH1GQ495M9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USH1GQ495M9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USH1GQ495M9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.79■□□□□ 0.76
USH1GQ495M9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USH1GQ495M9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.79■□□□□ 0.76
USH1GQ495M9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USH1GQ495M9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USH1GQ495M9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
USH1GQ495M9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USH1GQ495M9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USH1GQ495M9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.79■□□□□ 0.76
USH1GQ495M9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.79■□□□□ 0.76
USH1GQ495M9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.79■□□□□ 0.76
USH1GQ495M9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.79■□□□□ 0.76
USH1GQ495M9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.79■□□□□ 0.76
USH1GQ495M9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.79■□□□□ 0.76
USH1GQ495M9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
USH1GQ495M9 AC010507.1-201ENST00000633895 436 ntBASIC19.79■□□□□ 0.76
USH1GQ495M9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USH1GQ495M9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms