Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-BQ31612 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-BQ31612 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-BQ31612 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-BQ31612 LINC01451-201ENST00000623792 534 ntBASIC16.68■□□□□ 0.26
HLA-BQ31612 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-BQ31612 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-BQ31612 UXT-AS1-201ENST00000590504 1525 ntBASIC16.68■□□□□ 0.26
HLA-BQ31612 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-BQ31612 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HLA-BQ31612 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-BQ31612 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-BQ31612 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.68■□□□□ 0.26
HLA-BQ31612 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-BQ31612 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-BQ31612 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-BQ31612 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-BQ31612 AC093503.3-201ENST00000624917 2352 ntBASIC16.67■□□□□ 0.26
HLA-BQ31612 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HLA-BQ31612 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HLA-BQ31612 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 AC005034.1-201ENST00000426657 489 ntBASIC16.67■□□□□ 0.26
HLA-BQ31612 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.67■□□□□ 0.26
HLA-BQ31612 AC002472.2-201ENST00000442739 958 ntBASIC16.67■□□□□ 0.26
HLA-BQ31612 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 TERF1P3-201ENST00000505638 1227 ntBASIC16.67■□□□□ 0.26
HLA-BQ31612 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-BQ31612 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-BQ31612 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-BQ31612 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-BQ31612 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HLA-BQ31612 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-BQ31612 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-BQ31612 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-BQ31612 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.66■□□□□ 0.26
HLA-BQ31612 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-BQ31612 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-BQ31612 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-BQ31612 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-BQ31612 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.66■□□□□ 0.26
HLA-BQ31612 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-BQ31612 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-BQ31612 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-BQ31612 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 AC005412.3-201ENST00000580309 715 ntBASIC16.66■□□□□ 0.26
HLA-BQ31612 RN7SL204P-201ENST00000582831 262 ntBASIC16.66■□□□□ 0.26
HLA-BQ31612 AL035252.4-201ENST00000624174 288 ntBASIC16.66■□□□□ 0.26
HLA-BQ31612 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-BQ31612 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-BQ31612 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-BQ31612 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-BQ31612 HCG11-201ENST00000411553 5696 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 FO538757.1-201ENST00000623083 1397 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-BQ31612 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms