Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH17Q12864 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CDH17Q12864 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH17Q12864 AL020989.1-201ENST00000422979 469 ntBASIC17.49■□□□□ 0.39
CDH17Q12864 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CDH17Q12864 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH17Q12864 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 AC124947.2-201ENST00000547118 1133 ntBASIC17.49■□□□□ 0.39
CDH17Q12864 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH17Q12864 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 AC093458.2-201ENST00000623150 629 ntBASIC17.49■□□□□ 0.39
CDH17Q12864 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 NKILA-202ENST00000614771 2598 ntBASIC17.49■□□□□ 0.39
CDH17Q12864 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH17Q12864 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH17Q12864 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CDH17Q12864 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDH17Q12864 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH17Q12864 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH17Q12864 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH17Q12864 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH17Q12864 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH17Q12864 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH17Q12864 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH17Q12864 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH17Q12864 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH17Q12864 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH17Q12864 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH17Q12864 MIR5100-201ENST00000579544 119 ntBASIC17.48■□□□□ 0.39
CDH17Q12864 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CDH17Q12864 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDH17Q12864 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH17Q12864 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH17Q12864 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH17Q12864 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDH17Q12864 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDH17Q12864 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDH17Q12864 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CDH17Q12864 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 NUS1P2-201ENST00000417358 873 ntBASIC17.47■□□□□ 0.39
CDH17Q12864 SIGLEC30P-201ENST00000455569 941 ntBASIC17.47■□□□□ 0.39
CDH17Q12864 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH17Q12864 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CDH17Q12864 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH17Q12864 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH17Q12864 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.47■□□□□ 0.39
CDH17Q12864 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.47■□□□□ 0.39
CDH17Q12864 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.47■□□□□ 0.39
CDH17Q12864 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDH17Q12864 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH17Q12864 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms