Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL1Q00532 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKL1Q00532 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL1Q00532 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKL1Q00532 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL1Q00532 TP73-AS1-210ENST00000637775 1455 ntBASIC17.05■□□□□ 0.32
CDKL1Q00532 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL1Q00532 KRT8P10-201ENST00000450021 1447 ntBASIC17.05■□□□□ 0.32
CDKL1Q00532 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKL1Q00532 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDKL1Q00532 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDKL1Q00532 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKL1Q00532 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.05■□□□□ 0.32
CDKL1Q00532 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDKL1Q00532 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKL1Q00532 AD001527.2-201ENST00000622994 785 ntBASIC17.05■□□□□ 0.32
CDKL1Q00532 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKL1Q00532 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 NSUN5P1-202ENST00000421140 1535 ntBASIC17.05■□□□□ 0.32
CDKL1Q00532 NSUN5P2-203ENST00000457352 1529 ntBASIC17.05■□□□□ 0.32
CDKL1Q00532 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 AGGF1P2-201ENST00000426656 2106 ntBASIC17.05■□□□□ 0.32
CDKL1Q00532 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKL1Q00532 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL1Q00532 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL1Q00532 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 AC106886.4-201ENST00000623557 2502 ntBASIC17.04■□□□□ 0.32
CDKL1Q00532 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL1Q00532 POM121L3P-201ENST00000419331 1163 ntBASIC17.04■□□□□ 0.32
CDKL1Q00532 LINC00265-3P-201ENST00000447588 903 ntBASIC17.04■□□□□ 0.32
CDKL1Q00532 MINOS1P3-201ENST00000457048 203 ntBASIC17.04■□□□□ 0.32
CDKL1Q00532 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL1Q00532 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.04■□□□□ 0.32
CDKL1Q00532 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.04■□□□□ 0.32
CDKL1Q00532 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL1Q00532 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 BNIP3P18-201ENST00000593976 575 ntBASIC17.04■□□□□ 0.32
CDKL1Q00532 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.04■□□□□ 0.32
CDKL1Q00532 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL1Q00532 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL1Q00532 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL1Q00532 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDKL1Q00532 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDKL1Q00532 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL1Q00532 INTS4P1-201ENST00000438455 1935 ntBASIC17.04■□□□□ 0.32
CDKL1Q00532 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL1Q00532 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDKL1Q00532 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.03■□□□□ 0.32
CDKL1Q00532 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL1Q00532 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.03■□□□□ 0.32
CDKL1Q00532 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms