Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 ATP5G2P1-201ENST00000433580 426 ntBASIC17.48■□□□□ 0.39
PRAMEP78395 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEP78395 AC012615.1-201ENST00000565797 1299 ntBASIC17.48■□□□□ 0.39
PRAMEP78395 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.48■□□□□ 0.39
PRAMEP78395 MIR3180-1-201ENST00000580374 94 ntBASIC17.48■□□□□ 0.39
PRAMEP78395 MIR3180-3-201ENST00000584616 94 ntBASIC17.48■□□□□ 0.39
PRAMEP78395 AC092329.2-201ENST00000598402 547 ntBASIC17.48■□□□□ 0.39
PRAMEP78395 AC092119.3-201ENST00000612618 583 ntBASIC17.48■□□□□ 0.39
PRAMEP78395 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEP78395 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEP78395 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEP78395 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEP78395 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.47■□□□□ 0.39
PRAMEP78395 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEP78395 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.47■□□□□ 0.39
PRAMEP78395 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PRAMEP78395 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.47■□□□□ 0.39
PRAMEP78395 IGHV3-47-201ENST00000425060 335 ntBASIC17.47■□□□□ 0.39
PRAMEP78395 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PRAMEP78395 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.47■□□□□ 0.39
PRAMEP78395 BNIP3P18-201ENST00000593976 575 ntBASIC17.47■□□□□ 0.39
PRAMEP78395 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.47■□□□□ 0.39
PRAMEP78395 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PRAMEP78395 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEP78395 AL353593.2-201ENST00000602529 1483 ntBASIC17.47■□□□□ 0.39
PRAMEP78395 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEP78395 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRAMEP78395 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.47■□□□□ 0.39
PRAMEP78395 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRAMEP78395 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 AC008894.3-201ENST00000624324 3103 ntBASIC17.46■□□□□ 0.39
PRAMEP78395 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRAMEP78395 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEP78395 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.46■□□□□ 0.39
PRAMEP78395 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEP78395 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 STK25P1-201ENST00000585406 838 ntBASIC17.46■□□□□ 0.39
PRAMEP78395 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PRAMEP78395 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.46■□□□□ 0.39
PRAMEP78395 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRAMEP78395 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.46■□□□□ 0.39
PRAMEP78395 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms